diff --git a/CITATIONS.md b/CITATIONS.md index c2eba2c..512e66e 100644 --- a/CITATIONS.md +++ b/CITATIONS.md @@ -1,9 +1,9 @@ # Citations & References The bibtex entries for **PyAutoLens** and its affiliated software packages can be found -[here](https://github.com/Jammy2211/PyAutoLens/blob/main/files/citations.bib), with example text for citing **PyAutoLens** -in [.tex format here](https://github.com/Jammy2211/PyAutoLens/blob/main/files/citations.tex) format here and -[.md format here](https://github.com/Jammy2211/PyAutoLens/blob/main/files/citations.md). As shown in the examples, we +[here](https://github.com/PyAutoLabs/PyAutoLens/blob/main/files/citations.bib), with example text for citing **PyAutoLens** +in [.tex format here](https://github.com/PyAutoLabs/PyAutoLens/blob/main/files/citations.tex) format here and +[.md format here](https://github.com/PyAutoLabs/PyAutoLens/blob/main/files/citations.md). As shown in the examples, we would greatly appreciate it if you mention **PyAutoLens** by name and include a link to our GitHub page! **PyAutoLens** is published in the [Journal of Open Source Software](https://joss.theoj.org/papers/10.21105/joss.02825#) and its diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md index 1548dfe..b7898bb 100755 --- a/CODE_OF_CONDUCT.md +++ b/CODE_OF_CONDUCT.md @@ -301,7 +301,7 @@ the situation is not yet resolved. ## License -This code of conduct has been adapted from [*NUMFOCUS code of conduct*](https://github.com/numfocus/numfocus/blob/main/manual/numfocus-coc.md#the-short-version), -which is adapted from numerous sources, including the [*Geek Feminism wiki, created by the Ada Initiative and other volunteers, which is under a Creative Commons Zero license*](http://geekfeminism.wikia.com/wiki/Conference_anti-harassment/Policy), the [*Contributor Covenant version 1.2.0*](http://contributor-covenant.org/version/1/2/0/), the [*Bokeh Code of Conduct*](https://github.com/bokeh/bokeh/blob/main/CODE_OF_CONDUCT.md), the [*SciPy Code of Conduct*](https://github.com/jupyter/governance/blob/main/conduct/enforcement.md), the [*Carpentries Code of Conduct*](https://docs.carpentries.org/topic_folders/policies/code-of-conduct.html#enforcement-manual), and the [*NeurIPS Code of Conduct*](https://neurips.cc/public/CodeOfConduct). +This code of conduct has been adapted from [*NUMFOCUS code of conduct*](https://numfocus.org/code-of-conduct), +which is adapted from numerous sources, including the [*Geek Feminism wiki, created by the Ada Initiative and other volunteers, which is under a Creative Commons Zero license*](http://geekfeminism.wikia.com/wiki/Conference_anti-harassment/Policy), the [*Contributor Covenant version 1.2.0*](http://contributor-covenant.org/version/1/2/0/), the [*Bokeh Code of Conduct*](https://github.com/bokeh/bokeh/blob/main/docs/CODE_OF_CONDUCT.md), the [*SciPy Code of Conduct*](https://github.com/jupyter/governance/blob/main/conduct/enforcement.md), the [*Carpentries Code of Conduct*](https://docs.carpentries.org/topic_folders/policies/code-of-conduct.html#enforcement-manual), and the [*NeurIPS Code of Conduct*](https://neurips.cc/public/CodeOfConduct). **PyAutoLens Code of Conduct is licensed under the [Creative Commons Attribution 3.0 Unported License](https://creativecommons.org/licenses/by/3.0/).** \ No newline at end of file diff --git a/notebooks/chapter_1_introduction/tutorial_1_grids_and_galaxies.ipynb b/notebooks/chapter_1_introduction/tutorial_1_grids_and_galaxies.ipynb index a34ee33..b4111e7 100644 --- a/notebooks/chapter_1_introduction/tutorial_1_grids_and_galaxies.ipynb +++ b/notebooks/chapter_1_introduction/tutorial_1_grids_and_galaxies.ipynb @@ -14,7 +14,7 @@ "\n", "Here is a schematic of a strong gravitational lens:\n", "\n", - "![Schematic of Gravitational Lensing](https://raw.githubusercontent.com/Jammy2211/PyAutoLens/main/docs/overview/images/overview_1_lensing/schematic.jpg)\n", + "![Schematic of Gravitational Lensing](https://raw.githubusercontent.com/PyAutoLabs/PyAutoLens/main/docs/overview/images/overview_1_lensing/schematic.jpg)\n", "**Credit: F. Courbin, S. G. Djorgovski, G. Meylan, et al., Caltech / EPFL / WMKO**\n", "https://www.astro.caltech.edu/~george/qsolens/\n", "\n", diff --git a/notebooks/chapter_1_introduction/tutorial_8_summary.ipynb b/notebooks/chapter_1_introduction/tutorial_8_summary.ipynb index ce075cb..5329f25 100644 --- a/notebooks/chapter_1_introduction/tutorial_8_summary.ipynb +++ b/notebooks/chapter_1_introduction/tutorial_8_summary.ipynb @@ -244,13 +244,13 @@ "code at some point in the future. Firstly, you should note that all of the code we discuss throughout the **HowToLens** \n", "lectures is not contained in just one project (e.g. the **PyAutoLens** GitHub repository) but in fact four repositories:\n", "\n", - "**PyAutoFit** - Everything required for lens modeling (the topic of chapter 2): https://github.com/rhayes777/PyAutoFit\n", + "**PyAutoFit** - Everything required for lens modeling (the topic of chapter 2): https://github.com/PyAutoLabs/PyAutoFit\n", "\n", - "**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/Jammy2211/PyAutoArray\n", + "**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/PyAutoLabs/PyAutoArray\n", "\n", - "**PyAutoGalaxy** - Contains the light profiles, mass profiles and galaxies: https://github.com/Jammy2211/PyAutoGalaxy\n", + "**PyAutoGalaxy** - Contains the light profiles, mass profiles and galaxies: https://github.com/PyAutoLabs/PyAutoGalaxy\n", "\n", - "**PyAutoLens** - Everything strong lensing: https://github.com/Jammy2211/PyAutoLens\n", + "**PyAutoLens** - Everything strong lensing: https://github.com/PyAutoLabs/PyAutoLens\n", "\n", "Instructions on how to build these projects from source are provided here:\n", "\n", @@ -270,7 +270,7 @@ "Finally, if you enjoyed doing the **HowToLens** tutorials please git us a star on the **PyAutoLens** GitHub\n", "repository: \n", "\n", - " https://github.com/Jammy2211/PyAutoLens\n", + " https://github.com/PyAutoLabs/PyAutoLens\n", "\n", "Even the smallest bit of exposure via a GitHub star can help our project grow!" ] diff --git a/notebooks/chapter_2_lens_modeling/tutorial_1_non_linear_search.ipynb b/notebooks/chapter_2_lens_modeling/tutorial_1_non_linear_search.ipynb index 475f687..01359a4 100644 --- a/notebooks/chapter_2_lens_modeling/tutorial_1_non_linear_search.ipynb +++ b/notebooks/chapter_2_lens_modeling/tutorial_1_non_linear_search.ipynb @@ -185,7 +185,7 @@ "__PyAutoFit__\n", "\n", "Modeling uses the probabilistic programming language\n", - "[PyAutoFit](https://github.com/rhayes777/PyAutoFit), an open-source project that allows complex model\n", + "[PyAutoFit](https://github.com/PyAutoLabs/PyAutoFit), an open-source project that allows complex model\n", "fitting techniques to be straightforwardly integrated into scientific modeling software. \n", "\n", "**PyAutoFit** is actually a spin-off project of **PyAutoLen**. whereby we found that the statistic techniques and\n", diff --git a/scripts/chapter_1_introduction/tutorial_1_grids_and_galaxies.py b/scripts/chapter_1_introduction/tutorial_1_grids_and_galaxies.py index 425c5a2..689560a 100644 --- a/scripts/chapter_1_introduction/tutorial_1_grids_and_galaxies.py +++ b/scripts/chapter_1_introduction/tutorial_1_grids_and_galaxies.py @@ -9,7 +9,7 @@ Here is a schematic of a strong gravitational lens: -![Schematic of Gravitational Lensing](https://raw.githubusercontent.com/Jammy2211/PyAutoLens/main/docs/overview/images/overview_1_lensing/schematic.jpg) +![Schematic of Gravitational Lensing](https://raw.githubusercontent.com/PyAutoLabs/PyAutoLens/main/docs/overview/images/overview_1_lensing/schematic.jpg) **Credit: F. Courbin, S. G. Djorgovski, G. Meylan, et al., Caltech / EPFL / WMKO** https://www.astro.caltech.edu/~george/qsolens/ diff --git a/scripts/chapter_1_introduction/tutorial_8_summary.py b/scripts/chapter_1_introduction/tutorial_8_summary.py index 78b5d20..3ca34b7 100644 --- a/scripts/chapter_1_introduction/tutorial_8_summary.py +++ b/scripts/chapter_1_introduction/tutorial_8_summary.py @@ -175,13 +175,13 @@ code at some point in the future. Firstly, you should note that all of the code we discuss throughout the **HowToLens** lectures is not contained in just one project (e.g. the **PyAutoLens** GitHub repository) but in fact four repositories: -**PyAutoFit** - Everything required for lens modeling (the topic of chapter 2): https://github.com/rhayes777/PyAutoFit +**PyAutoFit** - Everything required for lens modeling (the topic of chapter 2): https://github.com/PyAutoLabs/PyAutoFit -**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/Jammy2211/PyAutoArray +**PyAutoArray** - Handles all data structures and Astronomy dataset objects: https://github.com/PyAutoLabs/PyAutoArray -**PyAutoGalaxy** - Contains the light profiles, mass profiles and galaxies: https://github.com/Jammy2211/PyAutoGalaxy +**PyAutoGalaxy** - Contains the light profiles, mass profiles and galaxies: https://github.com/PyAutoLabs/PyAutoGalaxy -**PyAutoLens** - Everything strong lensing: https://github.com/Jammy2211/PyAutoLens +**PyAutoLens** - Everything strong lensing: https://github.com/PyAutoLabs/PyAutoLens Instructions on how to build these projects from source are provided here: @@ -201,7 +201,7 @@ Finally, if you enjoyed doing the **HowToLens** tutorials please git us a star on the **PyAutoLens** GitHub repository: - https://github.com/Jammy2211/PyAutoLens + https://github.com/PyAutoLabs/PyAutoLens Even the smallest bit of exposure via a GitHub star can help our project grow! """ diff --git a/scripts/chapter_2_lens_modeling/tutorial_1_non_linear_search.py b/scripts/chapter_2_lens_modeling/tutorial_1_non_linear_search.py index ee13f6c..a79b262 100644 --- a/scripts/chapter_2_lens_modeling/tutorial_1_non_linear_search.py +++ b/scripts/chapter_2_lens_modeling/tutorial_1_non_linear_search.py @@ -169,7 +169,7 @@ __PyAutoFit__ Modeling uses the probabilistic programming language -[PyAutoFit](https://github.com/rhayes777/PyAutoFit), an open-source project that allows complex model +[PyAutoFit](https://github.com/PyAutoLabs/PyAutoFit), an open-source project that allows complex model fitting techniques to be straightforwardly integrated into scientific modeling software. **PyAutoFit** is actually a spin-off project of **PyAutoLen**. whereby we found that the statistic techniques and