MolAlign is the command-line powerhouse of the suite. It is designed to stitch multiple reaction segments (e.g., separate IRC calculations) into one seamless, physically consistent trajectory.

MolVista is a powerful Python-based graphical suite designed for the visualization, alignment, and splicing of chemical reaction paths (e.g., IRC trajectories). It comes paired with MolAlign, a command-line tool for automated batch processing of complex multi-segment reactions.